Juan Touriño - List of Publications

A. Rodríguez-Iglesias, M.J. Martín, J. Touriño. Clupiter: A Raspberry Pi Mini-supercomputer for Educational Purposes. The 26th IEEE International Conference on Computational Science and Engineering, CSE-2023, pp.2400-2405. Exeter (United Kingdom), November 2023. [DL]

M. Horro, L.-N. Pouchet, G. Rodríguez, J. Touriño. Custom High-Performance Vector Code Generation for Data-Specific Sparse Computations. 31st International Conference on Parallel Architectures and Compilation Techniques, PACT 2022, ACM, pp.160-171. Chicago, Illinois (USA), October 2022. [DL]

M. Horro, L.-N. Pouchet, G. Rodríguez, J. Touriño. MARTA: Multi-configuration Assembly pRofiler and Toolkit for performance Analysis. 2022 IEEE International Symposium on Performance Analysis of Systems and Software, ISPASS-2022, IEEE Computer Society, pp.79-89. Singapore, May 2022. [DL]

M. Horro (Advisors: G. Rodríguez, J. Touriño). Manycore Architectures and SIMD Optimizations for High Performance Computing. PhD Thesis, Department of Computer Engineering, University of A Coruña (Spain). May 2022. [DL]

G. Rodríguez, L.-N. Pouchet, J. Touriño. Representing Integer Sequences Using Piecewise-affine Loops . Mathematics, 9(19):2368, October 2021. [DL]

S. Kommrusch, M. Horro, L.-N. Pouchet, G. Rodríguez, J. Touriño. Optimizing Coherence Traffic in Manycore Processors Using Closed-form Caching/Home Agent Mappings. IEEE Access, 9:28930-28945, February 2021. [DL]

M. Horro, G. Rodríguez, J. Touriño. Simulating the Network Activity of Modern Manycores. IEEE Access, 7:81195-81210, July 2019. [DL]

M. Horro, M.T. Kandemir, L.-N. Pouchet, G. Rodríguez, J. Touriño. Effect of Distributed Directories in Mesh Interconnects. 56th ACM/EDAC/IEEE Design Automation Conference, DAC 2019, ACM, pp.51:1-51:6. Las Vegas, Nevada (USA), June 2019. [DL]

G. Rodríguez, M.T. Kandemir, J. Touriño. Affine Modeling of Program Traces. IEEE Transactions on Computers, 68(2):294-300, February 2019. [DL]

M. Horro, G. Rodríguez, J. Touriño, M.T. Kandemir. Architectural Exploration of Heterogeneous Memory Systems. 19th Workshop on Compilers for Parallel Computers, CPC'2016 (8 pages). Valladolid (Spain), July 2016. [DL](arXiv)

J.M. Andión, M. Arenaz, F. Bodin, G. Rodríguez, J. Touriño. Locality-Aware Automatic Parallelization for GPGPU with OpenHMPP Directives. International Journal of Parallel Programming, 44(3):620-643, June 2016. [DL] [SharedIt](view-only version)

G. Rodríguez, J.M. Andión, M.T. Kandemir, J. Touriño. Trace-based Affine Reconstruction of Codes. 14th Annual IEEE/ACM International Symposium on Code Generation and Optimization, CGO 2016, ACM, pp.139-149. Barcelona (Spain), March 2016. [DL]

G. Rodríguez, J. Touriño, M.T. Kandemir. Volatile STT-RAM Scratchpad Design and Data Allocation for Low Energy. 10th International Conference on High Performance and Embedded Architectures and Compilers, HiPEAC 2015. Amsterdam (The Netherlands), January 2015 (see ACM TACO paper below).

J.M. Andión, M. Arenaz, F. Bodin, G. Rodríguez, J. Touriño. Locality-Aware Automatic Parallelization for GPGPU with OpenHMPP Directives. 7th International Symposium on High-level Parallel Programming and Applications, HLPP 2014, pp.217-237. Amsterdam (The Netherlands), July 2014.

J.M. Andión, M. Arenaz, G. Rodríguez, J. Touriño. A Parallelizing Compiler for Multicore Systems. 17th International Workshop on Software and Compilers for Embedded Systems, SCOPES 2014, ACM Press, pp.138-141. Sankt Goar (Germany), June 2014. [DL]

G. Rodríguez, J. Touriño, M.T. Kandemir. Volatile STT-RAM Scratchpad Design and Data Allocation for Low Energy. ACM Transactions on Architecture and Code Optimization, 11(4), Article 38, 26 pages, December 2014. [DL]

J.M. Andión, M. Arenaz, G. Rodríguez, J. Touriño. A Novel Compiler Support for Automatic Parallelization on Multicore Systems. Parallel Computing, 39(9):442-460, September 2013. [DL]

J.M. Andión, M. Arenaz, J. Touriño. Automatic Partitioning of Sequential Applications Driven by Domain-Independent Kernels. 15th Workshop on Compilers for Parallel Computers, CPC'2010 (15 pages). Vienna (Austria), July 2010.

J.M. Andión, M. Arenaz, J. Touriño. A New Intermediate Representation for GCC Based on the XARK Compiler Framework. 2nd International Workshop on GCC Research Opportunities, GROW'10 (in conjunction with the International Conference on High-Performance Embedded Architectures and Compilers, HiPEAC 2010), pp.89-100. Pisa (Italy), January 2010.

M. Arenaz, J. Touriño, R. Doallo. A Kernel-Based Intermediate Representation for Automatic Parallelization on Multi-Core Systems. 14th Workshop on Compilers for Parallel Computers, CPC'2009 (12 pages). Zurich (Switzerland), January 2009.

M. Arenaz, J. Touriño, R. Doallo. XARK: An EXtensible Framework for Automatic Recognition of Computational Kernels. ACM Transactions on Programming Languages and Systems, 30(6), Article 32, 56 pages, October 2008. [DL]

M. Arenaz, P. Amoedo, J. Touriño. Efficiently Building the Gated Single Assignment Form in Codes with Pointers in Modern Optimizing Compilers. 14th International Euro-Par Conference, Euro-Par 2008, Lecture Notes in Computer Science Vol. 5168, pp.317-326. Las Palmas de Gran Canaria (Spain), August 2008. [DL]

J. Setoain, C. Tenllado, J.I. Gómez, M. Arenaz, M. Prieto, J. Touriño. Towards Automatic Code Generation for GPUs. 9th International Workshop on State-of-the-Art in Scientific and Parallel Computing, PARA'2008 (10 pages). Trondheim (Norway), May 2008.

J. Touriño, B.B. Fraguela, R. Doallo, M. Arenaz. Current Trends in Compilers for Parallel Computers (Editorial). Concurrency and Computation: Practice and Experience, 19(18):2313-2316, December 2007. [DL] [Special Issue on Compilers for Parallel Computers]

M. Arenaz, J. Touriño, R. Doallo. Program Behavior Characterization through Advanced Kernel Recognition. 13th International Euro-Par Conference, Euro-Par 2007, Lecture Notes in Computer Science Vol. 4641, pp.237-247. Rennes (France), August 2007. [DL]

M. Arenaz, J. Touriño, R. Doallo. Program Behavior Characterization through Advanced Kernel Recognition. 13th Workshop on Compilers for Parallel Computers, CPC'2007 (11 pages). Lisbon (Portugal), July 2007.

M. Arenaz, J. Touriño, R. Doallo. An Inspector-Executor Algorithm for Irregular Assignment Parallelization. 2nd International Symposium on Parallel and Distributed Processing and Applications, ISPA 2004, Lecture Notes in Computer Science Vol. 3358, pp.4-15. Hong Kong (China), December 2004. [DL]

M. Arenaz, J. Touriño, R. Doallo. Compiler Support for Parallel Code Generation through Kernel Recognition. 18th IEEE International Parallel and Distributed Processing Symposium, IPDPS'04, IEEE Computer Society, pp.79b (10 pages). Santa Fe, New Mexico (USA), April 2004. [DL]

M. Arenaz, J. Touriño, R. Doallo. A GSA-Based Compiler Infrastructure to Extract Parallelism from Complex Loops. 17th ACM International Conference on Supercomputing, ICS'03, ACM Press, pp. 193-204. San Francisco, California (USA), June 2003. [DL]

M. Arenaz (Advisors: J. Touriño, R. Doallo). Compiler Framework for the Automatic Detection of Loop-Level Parallelism, PhD Thesis, Department of Electronics and Systems, University of A Coruña (Spain). March 2003.

M.J. Martín, D.E. Singh, J. Touriño, F.F. Rivera. Improving Locality in the Parallelization of Doacross Loops. 8th International Euro-Par Conference, Euro-Par 2002, Lecture Notes in Computer Science Vol. 2400, pp.275-279. Paderborn (Germany), August 2002. [DL]

M. Arenaz, J. Touriño, R. Doallo. Towards Detection of Coarse-Grain Loop-Level Parallelism in Irregular Computations. 8th International Euro-Par Conference, Euro-Par 2002, Lecture Notes in Computer Science Vol. 2400, p.289-298. Paderborn (Germany), August 2002. [DL]

M.J. Martín, D.E. Singh, J. Touriño, F.F. Rivera. Exploiting Locality in the Run-Time Parallelization of Irregular Loops. 31st International Conference on Parallel Processing, ICPP'02, IEEE Computer Society, pp.27-34. Vancouver (Canada), August 2002. [DL]

M. Arenaz, J. Touriño, R. Doallo. Irregular Assignment Computations on cc-NUMA Multiprocessors. 4th International Symposium on High Performance Computing, ISHPC-IV, Lecture Notes in Computer Science Vol. 2327, pp.361-369. Kansai Science City (Japan), May 2002. [DL]

M. Arenaz, J. Touriño, R. Doallo. Run-Time Support for Parallel Irregular Assignments. 6th Workshop on Languages, Compilers, and Run-time Systems for Scalable Computers, LCR'02, pp.19-24. Washington DC (USA), March 2002.

M. Arenaz, J. Touriño, R. Doallo. A Compiler Framework to Detect Parallelism in Irregular Codes. 14th International Workshop on Languages and Compilers for Parallel Computing, LCPC'2001, Lecture Notes in Computer Science Vol. 2624, pp.306-320. Cumberland Falls, Kentucky (USA), August 2001 (LNCS volume published in 2003). [DL]

2. Big Data, cloud computing, grid computing and distributed systems

O. Castellanos-Rodríguez, R.R. Expósito, J. Enes, G.L. Taboada, J. Touriño. Serverless-like Platform for Container-based YARN Clusters. Future Generation Computer Systems, 155:256-271, June 2024. [DL]

J. Enes, R.R. Expósito, J. Fuentes, J. López Cacheiro, J. Touriño. A Pipeline Architecture for Feature-based Unsupervised Clustering Using Multivariate Time Series from HPC Jobs. Information Fusion, 93:1-20, May 2023. [DL]

R.R. Expósito, J. Veiga, J. Touriño. Performance Evaluation of Big Data Analysis. In Encyclopedia of Big Data Technologies, Springer, February 2022. [DL]

J. Enes (Advisors: R.R. Expósito, J. Touriño). Automatic Rescaling and Tuning of Big Data Applications on Container-based Virtual Environments. PhD Thesis, Department of Computer Engineering, University of A Coruña (Spain). October 2020. [DL]

J. Enes, G. Fieni, R.R. Expósito, R. Rouvoy, J. Touriño. Power Budgeting of Big Data Applications in Container-based Clusters. 22nd IEEE International Conference on Cluster Computing, CLUSTER 2020. IEEE Computer Society, pp.281-287. Kobe (Japan), September 2020. [DL]

J. Enes, R.R. Expósito, J. Touriño. Real-time Resource Scaling Platform for Big Data Workloads on Serverless Environments. Future Generation Computer Systems, 105:361-379, April 2020. [DL]

J. Veiga (Advisors: R.R. Expósito, J. Touriño). Evaluation and Optimization of Big Data Processing on High Performance Computing Systems. PhD Thesis, Department of Computer Engineering, University of A Coruña (Spain). February 2019. [DL]

J. Veiga, R.R. Expósito, B. Raffin, J. Touriño. Optimization of Real-world MapReduce Applications with Flame-MR: Practical Use Cases. IEEE Access, 6:69750-69762, December 2018. [DL]

J. Enes, J.L. Cacheiro R.R. Expósito, J. Touriño. Big Data-Oriented PaaS Architecture with Disk-as-a-Resource Capability and Container-Based Virtualization. Journal of Grid Computing, 16(4):587-605, December 2018. [DL] [SharedIt](view-only version)

J. Enes, R.R. Expósito, J. Touriño. BDWatchdog: Real-time Monitoring and Profiling of Big Data Applications and Frameworks. Future Generation Computer Systems, 87:420-437, October 2018. [DL]

J. Veiga, R.R. Expósito, G.L. Taboada, J. Touriño. Enhancing In-memory Efficiency for MapReduce-based Data Processing. Journal of Parallel and Distributed Computing, 120:323-338, October 2018. [DL]

J. Veiga, J. Enes, R.R. Expósito, J. Touriño. BDEv 3.0: Energy Efficiency and Microarchitectural Characterization of Big Data Processing Frameworks. Future Generation Computer Systems, 86:565-581, September 2018. [DL]

J. Veiga, R.R. Expósito, J. Touriño. Performance Evaluation of Big Data Analysis. In Encyclopedia of Big Data Technologies, Springer, January 2018. [DL]

J. Veiga, R.R. Expósito, G.L. Taboada, J. Touriño. Flame-MR: an Event-Driven Architecture for MapReduce Applications. Future Generation Computer Systems, 65:46-56, December 2016. [DL]

J. Veiga, R.R. Expósito, X.C. Pardo, G.L. Taboada, J. Touriño. Performance Evaluation of Big Data Frameworks for Large-scale Data Analytics. 2016 IEEE International Conference on Big Data, IEEE Big Data 2016. IEEE Computer Society, pp.424-431. Washington D.C. (USA), December 2016. [DL]

R.R. Expósito, G.L. Taboada, S. Ramos, J. Touriño, R. Doallo. Performance Evaluation of Data-Intensive Computing Applications on a Public IaaS Cloud. The Computer Journal, 59(3):287-307, March 2016. [DL]

J. Veiga, R.R. Expósito, G.L. Taboada, J. Touriño. Analysis and Evaluation of MapReduce Solutions on an HPC Cluster. Computers & Electrical Engineering, 50:200-216, February 2016. [DL]

J. Veiga, R.R. Expósito, G.L. Taboada, J. Touriño. MREv: an Automatic MapReduce Evaluation Tool for Big Data Workloads. 15th International Conference on Computational Science, ICCS 2015, Procedia Computer Science Vol. 51, pp.80-89. Reykjavík (Iceland), June 2015. [DL]

J. Veiga, G.L. Taboada, X.C. Pardo, J. Touriño. The HPS3 Service: Reduction of Cost and Transfer Time for Storing Data on Clouds. 16th IEEE International Conference on High Performance Computing and Communications, HPCC-14. IEEE Computer Society Press, pp.213-220. Paris (France), August 2014. [DL]

R.R. Expósito, G.L. Taboada, S. Ramos, J. González-Domínguez, J. Touriño, R. Doallo. Analysis of I/O Performance on an Amazon EC2 Cluster Compute and High I/O Platform. Journal of Grid Computing, 11(4):613-631, December 2013. [DL]

R.R. Expósito, G.L. Taboada, S. Ramos, J. Touriño, R. Doallo. Evaluation of Messaging Middleware for High-Performance Cloud Computing. Personal and Ubiquitous Computing, 17(8):1709-1719, December 2013. [DL]

R.R. Expósito, G.L. Taboada, S. Ramos, J. Touriño, R. Doallo. General-Purpose Computation on GPUs for High Performance Cloud Computing. Concurrency and Computation: Practice and Experience, 25(12):1628-1642, August 2013. [DL]

R.R. Expósito, G.L. Taboada, S. Ramos, J. Touriño, R. Doallo. Performance Analysis of HPC Applications in the Cloud. Future Generation Computer Systems, 29(1):218-229, January 2013. [DL]

I. Díaz, G. Fernández, P. González, M.J. Martín, J. Touriño. Extending the Globus Information Service with the Common Information Model. 9th IEEE International Symposium on Parallel and Distributed Processing with Applications, ISPA 2011, IEEE Computer Society, pp.113-119. Busan (Korea), May 2011. [DL]

I. Díaz (Advisor: J. Touriño). The AdCIM Framework: Extraction, Integration and Persistence of the Configuration of Distributed System. PhD Thesis, Department of Electronics and Systems, University of A Coruña (Spain). July 2010. [DL]

I. Díaz, C. Popi, O. Festor, J. Touriño, R. Doallo. Ontological Configuration Management for Wireless Mesh Routers. 9th IEEE International Workshop on IP Operations and Management, IPOM 2009, Lecture Notes in Computer Science Vol. 5843, pp.116-129. Venice (Italy), October 2009. [DL]

I. Díaz, G. Fernández, M.J. Martín, P. González, J. Touriño. Integrating the Common Information Model with MDS4. 9th IEEE/ACM International Conference on Grid Computing, Grid 2008, IEEE Computer Society, pp.298-303. Tsukuba (Japan), September 2008. [DL]

I. Díaz, J. Touriño, R. Doallo. Towards Low-Latency Model-Oriented Distributed Systems Management. 10th Asia-Pacific Network Operations and Management Symposium, APNOMS 2007, Lecture Notes in Computer Science Vol. 4773, pp.41-50. Sapporo (Japan), October 2007. [DL]

J. Touriño. Grid Education and Grid-Based Technologies Applied to Education: Ongoing Activities (Editorial). IEEE Transactions on Education, 50(1):1-2, February 2007. [DL] [Special Issue on Grid-Based Technologies Applied to Education]

J. Touriño, M.J. Martín, J. Tarrío, M. Arenaz. A Grid Portal for an Undergraduate Parallel Programming Course. IEEE Transactions on Education, 48(3):391-399, August 2005. [DL]

I. Díaz, J. Touriño, J. Salceda, R. Doallo. A Framework Focus on Configuration Modeling and Integration with Transparent Persistence. 1st Workshop on System Management Tools for Large-Scale Parallel Systems (in conjunction with the 19th IEEE International Parallel and Distributed Processing Symposium, IPDPS'2005), IEEE Computer Society, pp. 297 (8 pages). Denver, Colorado (USA), April 2005. [DL]

J. Tarrío, J. Touriño, M.J. Martín, P. González, R. Doallo. A Grid Portal to Support High-Performance Scientific Computing on Distributed Resources. IEICE Transactions on Information and Systems (Special Issue on Hardware/Software Support for High-Performance Scientific and Engineering Computing), E87-D(7):1843-1849, July 2004. [DL]

J. Salceda, I. Díaz, J. Touriño, R. Doallo. A Middleware Architecture for Distributed Systems Management. Journal of Parallel and Distributed Computing, 64(6):759-766, June 2004. [DL]

J. Salceda, I. Díaz, J. Touriño, R. Doallo. CIM Modeling for System Management (invited talk). 2003 Large Scale System Configuration Workshop at the 17th Usenix Large Installation Systems Administration Conference, LISA'03. San Diego, California (USA), October 2003. [DL]

3. Parallel algorithms & applications

Bioinformatics

O. Castellanos-Rodríguez, R.R. Expósito, J. Touriño. SeQual-Stream: Approaching Stream Processing to Quality Control of NGS Datasets. BMC Bioinformatics, 24:403, October 2023. [DL]

A. Fernández-Fraga, J. González-Domínguez, J. Touriño. ParRADMeth: Identification of Differentially Methylated Regions on Multicore Clusters. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 20(3):2041-2049, May-June 2023. [DL]

I. Amatria-Barral, J. González-Domínguez, J. Touriño. PATO: Genome-wide Prediction of lncRNA-DNA Triple Helices. Bioinformatics, 39(3):btad134, March 2023. [DL]

I. Amatria-Barral, J. González-Domínguez, J. Touriño. Parallel Construction of RNA Databases for Extensive lncRNA-RNA Interaction Prediction. The 38th ACM/SIGAPP Symposium on Applied Computing, SAC 2023, ACM, pp.555-558. Tallinn (Estonia), March 2023. [DL]

O. Castellanos-Rodríguez, R.R. Expósito, J. Touriño. Accelerating the Quality Control of Genetic Sequences through Stream Processing. The 38th ACM/SIGAPP Symposium on Applied Computing, SAC 2023, ACM, pp.398-401. Tallinn (Estonia), March 2023. [DL]

I. Amatria-Barral, J. González-Domínguez, J. Touriño. pRIblast: A Highly Efficient Parallel Application for Comprehensive lncRNA-RNA Interaction Prediction. Future Generation Computer Systems, 138:270-279, January 2023. [DL]

R.R. Expósito, M. Martínez-Sánchez, J. Touriño. SparkEC: Speeding up Alignment-based DNA Error Correction Tools. BMC Bioinformatics, 23:464, November 2022. [DL]

R.R. Expósito, J. González-Domínguez, J. Touriño. SMusket: Spark-based DNA Error Correction on Distributed-memory Systems. Future Generation Computer Systems, 111:698-713, October 2020. [DL]

R.R. Expósito, J. González-Domínguez, J. Touriño. HSRA: Hadoop-based Spliced Read Aligner for RNA Sequencing Data. PLoS One, 13(7):e0201483, July 2018. [DL]

R.R. Expósito, J. Veiga, J. González-Domínguez, J. Touriño. MarDRe: Efficient MapReduce-based Removal of Duplicate DNA Reads in the Cloud. Bioinformatics, 33(17):2762-2764, September 2017. [DL]

J. González-Domínguez, Y. Liu, J. Touriño, B. Schmidt. MSAProbs-MPI: Parallel Multiple Sequence Aligner for Distributed-Memory Systems. Bioinformatics, 32(24):3826-3828, December 2016. [DL]

J. González-Domínguez, S. Ramos, J. Touriño, B. Schmidt. Parallel Pairwise Epistasis Detection on Heterogeneous Computing Architectures. IEEE Transactions on Parallel and Distributed Systems, 27(8):2329-2340, August 2016. [DL]

Artificial Intelligence (Machine Learning)

B. Beceiro, J. González-Domínguez, L. Morán-Fernández, V. Bolón-Canedo, J. Touriño. CUDA Acceleration of MI-based Feature Selection Methods. Journal of Parallel and Distributed Computing, 190:104901, August 2024. [DL]

B. Beceiro, J. González-Domínguez, J. Touriño. Parallel-FST: A Feature Selection Library for Multicore Clusters. Journal of Parallel and Distributed Computing, 169:106-116, November 2022. [DL]

J. González-Domínguez, V. Bolón-Canedo, B. Freire, J. Touriño. Parallel Feature Selection for Distributed-Memory Clusters. Information Sciences, 496:399-409, September 2019. [DL]

C. Eiras-Franco, V. Bolón-Canedo, S. Ramos, J. González-Domínguez. A. Alonso-Betanzos, J. Touriño. Multithreaded and Spark Parallelization of Feature Selection Filters. Journal of Computational Science, 17:609-619, November 2016. [DL]

Particle dynamics

C. Teijeiro, G. Sutmann, G.L. Taboada, J. Touriño. Parallel Simulation of Brownian Dynamics on Shared Memory Systems with OpenMP and Unified Parallel C. The Journal of Supercomputing, 65(3):1050-1062, September 2013. [DL]

C. Teijeiro, G. Sutmann, G.L. Taboada, J. Touriño. Parallel Brownian Dynamics Simulations with the Message-Passing and PGAS Programming Models. Computer Physics Communications, 184(4):1191-1202, April 2013. [DL]

C. Teijeiro, G. Sutmann, G.L. Taboada, J. Touriño. Parallel Brownian Dynamics Simulation with MPI, OpenMP and UPC. Workshop on Hybrid Particle-Continuum Methods in Computational Materials Physics, HYBRID 2013, pp.25-39. Jülich (Germany), March 2013.

C. Teijeiro, G. Sutmann, G.L Taboada, J. Touriño. Parallelization and Performance Analysis of a Brownian Dynamics Simulation using OpenMP. 12th International Conference on Computational and Mathematical Methods in Science and Engineering, CMMSE 2012, pp.1143-1154. Murcia (Spain), July 2012.

Fluid mechanics

M. Arenaz, R. Doallo, J. Touriño, C. Vázquez. Efficient Parallel Numerical Solver for the Elastohydrodynamic Reynolds-Hertz Problem. Parallel Computing, 27(13):1743-1765, December 2001. [DL]

M. Arenaz, R. Doallo, J. Touriño, C. Vázquez. A Parallel Algorithm for an Elastohydrodynamic Piezoviscous Lubrication Problem, Parallel Numerical Computations with Applications (Chapter 13), The Kluwer International Series in Engineering and Computer Science, Volume 515, Kluwer Academic Publishers, pp.191-201, September 1999. [DL]

M. Arenaz, R.Doallo, J. Touriño, C. Vázquez. A Parallel Approach for Solving a Lubrication Problem in Industrial Devices. 7th International Conference on High-Performance Computing and Networking, HPCN'99, Lecture Notes in Computer Science Vol. 1593, pp.1087-1093. Amsterdam (The Netherlands), April 1999.

M. Arenaz, M. Amor, J. Touriño, G. García, C. Vázquez, R. Doallo. Multiprocessing on the AP3000 System for Solving a Lubrication Problem in Mechanical Engineering. 8th International Parallel Computing Workshop, PCW'98, pp.167-174. Singapore, September 1998.

Image synthesis

E.J. Padrón, M. Amor, J. Touriño, R. Doallo. Hierarchical Radiosity on Multicomputers: a Load-Balanced Approach. 10th SIAM Conference on Parallel Processing for Scientific Computing. Portsmouth, Virginia (USA), March 2001.

M. Amor, E.J. Padrón, J. Touriño, R. Doallo. Scheduling of a Hierarchical Radiosity Algorithm on a Distributed-Memory Multiprocessor. 4th International Meeting on Vector and Parallel Processing, VECPAR'2000, pp.581-591. Porto (Portugal), June 2000.

Environmental chemistry

D.E. Singh, M. Arenaz, F.F. Rivera, J.D. Bruguera, J. Touriño, R. Doallo, M.R. Méndez, J.A. Souto, J.J. Casares. Some Proposals about the Vector and Parallel Implementations of STEM-II. 8th International Conference on Development and Application of Computer Techniques to Environmental Studies, ENVIROSOFT 2000. In Development and Application of Computer Techniques to Environmental Studies VIII, WIT Press, pp.57-66. Bilbao (Spain), June 2000. [DL]

Sparse numerical algorithms

J. Touriño (Advisors: R. Doallo, E.L. Zapata). Parallelization and Compilation Issues of Sparse QR Algorithms, PhD Thesis, Department of Electronics and Systems, University of A Coruña (Spain). March 1998. [DL]

J. Touriño, R. Doallo. Local Pivoting for Sparse Factorizations on Multiprocessors. 7th Parallel Computing Workshop, PCW'97, pp. S.B.1-S.B.5. Canberra (Australia), September 1997.

R. Doallo, J. Touriño, F.M. Hermo. Sparse Matrix Operations in Vector and Parallel Processors. 5th International Conference on Applications of High Performance Computers in Engineering, HPC'97. In Applications of High Performance Computing in Engineering V, International Series on Advances in High Performance Computing, Volume 3, Computational Mechanics Publications, pp. 43-52. Santiago de Compostela (Spain), July 1997.

J. Touriño, R. Doallo. An Approach to Decrease Fill-in in Sparse Orthogonalizations on a MIMD Computer. 6th Parallel Computing Workshop, PCW'96, pp. S.B.1-S.B.5. Kawasaki (Japan), November 1996.

B.B. Fraguela, J. Touriño, R. Doallo. Sparse Orthogonalization on the Cray T3D (poster). 2nd European Cray MPP Workshop. Edinburgh (UK), July 1996.

J. Touriño, R. Doallo, E.L. Zapata. Sparse Givens QR Factorization on a Multiprocessor. 2nd International Conference on Massively Parallel Computing Systems, MPCS'96, IEEE Computer Society, pp.524-529. Ischia (Italy), May 1996.

R. Doallo, B.B. Fraguela, J. Touriño, E.L. Zapata. Parallel Sparse Modified Gram-Schmidt QR Decomposition. 4th International Conference on High-Performance Computing and Networking, HPCN'96, Lecture Notes in Computer Science Vol. 1067, pp.646-653. Brussels (Belgium), April 1996.

R. Doallo, J. Touriño, E.L. Zapata. Sparse Householder QR Factorization on a Mesh. 4th Euromicro Workshop on Parallel and Distributed Processing, PDP'96, IEEE Computer Society, pp.33-39. Braga (Portugal), January 1996. [DL]

R. Doallo, J. Touriño, F.F. Rivera. Solving the Least Squares Problem for Sparse Matrices on the AP1000. 4th Parallel Computing Workshop, PCW'95, pp.101-111. London (UK), September 1995.

4. Performance modeling, optimization and information gathering of HPC architectures

R.R. Expósito, J. Veiga, J. Touriño. Enabling Hardware Affinity in JVM-based Applications: A Case Study for Big Data. 20th International Conference on Computational Science, ICCS 2020, Lecture Notes in Computer Science Vol. 12137, pp.31-44. Amsterdam (The Netherlands), June 2020. [DL]

J. González-Domínguez, M.J. Martín, G.L. Taboada, R.R. Expósito, J. Touriño. The Servet 3.0 Benchmark Suite: Characterization of Network Performance Degradation. Computers & Electrical Engineering, 39(8):2483-2493, November 2013. [DL]

E. Georganas, J. González-Domínguez, E. Solomonik, Y. Zheng, J. Touriño, K. Yelick. Communication Avoiding and Overlapping for Numerical Linear Algebra. The 2012 ACM/IEEE International Conference for High Performance Computing, Networking, Storage and Analysis, SC'12, Article no. 100 (11 pages). Salt Lake City (USA), November 2012. [DL]

J. González-Domínguez, G.L. Taboada, B.B. Fraguela, M.J. Martín, J. Touriño. Automatic Mapping of Parallel Applications on Multicore Architectures using the Servet Benchmark Suite. Computers & Electrical Engineering, 38(2):258-269, March 2012. [DL]

J. González-Domínguez, G.L. Taboada, B.B. Fraguela, M.J. Martín, J. Touriño. Servet: A Benchmark Suite for Autotuning on Multicore Clusters. 24th IEEE International Parallel and Distributed Processing Symposium, IPDPS'2010, IEEE Computer Society (9 pages). Atlanta (USA), April 2010. [DL]

D. Andrade, M. Arenaz, B.B. Fraguela, J. Touriño, R. Doallo. Automated and Accurate Cache Behavior Analysis for Codes with Irregular Access Patterns. Concurrency and Computation: Practice and Experience, 19(18):2407-2423, December 2007. [DL]

D. Andrade, M. Arenaz, B.B. Fraguela, J. Touriño, R. Doallo. Automated and Accurate Cache Behavior Analysis for Codes with Irregular Access Patterns. 12th Workshop on Compilers for Parallel Computers, CPC'2006, pp.179-193. A Coruña (Spain), January 2006.

B.B. Fraguela, R. Doallo, J. Touriño, E.L. Zapata. A Compiler Tool to Predict Memory Hierarchy Performance of Scientific Codes. Parallel Computing, 30(2):225-248, February 2004. [DL]

5. Java/low-latency communications for HPC

R.R. Expósito, G.L. Taboada, S. Ramos, J. Touriño, R. Doallo. Low-Latency Java Communication Devices on RDMA-Enabled Networks. Concurrency and Computation: Practice and Experience, 27(17):4852-4879, December 2015. [DL]

S. Ramos, G.L. Taboada, R.R. Expósito, J. Touriño. Nonblocking Collectives for Scalable Java Communications. Concurrency and Computation: Practice and Experience, 27(5):1169-1187, April 2015. [DL]

R.R. Expósito (Advisors: G.L. Taboada, J. Touriño). Design and Evaluation of Low-Latency Communication Middleware on High Performance Computing Systems. PhD Thesis, Department of Electronics and Systems, University of A Coruña (Spain). November 2014. [DL]

R.R. Expósito, S. Ramos, G.L. Taboada, J. Touriño, R. Doallo. FastMPJ: A Scalable and Efficient Java Message-Passing Library . Cluster Computing, 17(3):1031-1050, September 2014. [DL]

S. Ramos (Advisors: G.L. Taboada, J. Touriño). High Performance Java for Multi-core Systems. PhD Thesis, Department of Electronics and Systems, University of A Coruña (Spain). October 2013. [DL]

G.L. Taboada, S. Ramos, R.R. Expósito, J. Touriño, R. Doallo. Java in the High Performance Computing Arena: Research, Practice and Experience. Science of Computer Programming, 78(5):425-444, May 2013. [DL]

J. Docampo, S. Ramos, G.L. Taboada, R.R. Expósito, J. Touriño, R. Doallo. Evaluation of Java for General Purpose GPU Computing. Workshop on Engineering Object Oriented Parallel Software, EOOPS (in conjunction with the 27th IEEE International Conference on Advanced Information Networking and Applications, AINA 2013), pp. 1398-1404. Barcelona (Spain), March 2013. [DL]

S. Ramos, G.L. Taboada, R.R. Expósito, J. Touriño, R. Doallo. Design of Scalable Java Communication Middleware for Multi-core Systems. The Computer Journal, 56(2):214-228, February 2013. [DL]

R.R. Expósito, G.L. Taboada, J. Touriño, R. Doallo. Design of Scalable Java Message-Passing Communications over Infiniband. The Journal of Supercomputing, 61(1):141-165, July 2012. [DL]

G.L. Taboada, J. Touriño, R. Doallo. F-MPJ: Scalable Java Message-Passing Communications on Parallel Systems. The Journal of Supercomputing, 60(1):117-140, April 2012. [DL]

G.L. Taboada, J. Touriño, R. Doallo, A. Shafi, M. Baker, B. Carpenter. Device Level Communication Libraries for High Performance Computing in Java. Concurrency and Computation: Practice and Experience, 23(18):2382-2403, December 2011. [DL]

S. Ramos, G.L. Taboada, J. Touriño, R. Doallo. Scalable Java Communication Middleware for Hybrid Shared/Distributed Memory Architectures. 13th IEEE International Conference on High Performance Computing and Communications, HPCC-11, IEEE Computer Society, pp.221-228. Banff (Canada), September 2011. [DL]

G.L. Taboada, S. Ramos, J. Touriño, R. Doallo. Design of Efficient Java Message-Passing Collectives on Multi-core Clusters. The Journal of Supercomputing, 55(2):126-154, February 2011. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Performance Analysis of Message-Passing Libraries on High-Speed Clusters. Computer Systems Science and Engineering, 25(1):63-78, January 2010.

G.L. Taboada, J. Touriño, R. Doallo. Java for High Performance Computing: Assessment of Current Research and Practice. 7th International Conference on the Principles and Practice of Programming in Java, PPPJ 2009, ACM Press, pp.30-39. Calgary (Canada), August 2009. [DL]

G.L. Taboada, J. Touriño, R. Doallo, Y. Lin, J. Han. Efficient Java Communication Libraries over InfiniBand. 11th IEEE International Conference on High Performance Computing and Communications, HPCC-09, IEEE Computer Society, pp.329-338. Seoul (Korea), June 2009. [DL]

G.L. Taboada (Advisors: J. Touriño, R. Doallo). Design of Efficient Java Communications for High Performance Computing. PhD Thesis, Department of Electronics and Systems, University of A Coruña (Spain). May 2009. [DL]

D.A. Mallón, G.L. Taboada, J. Touriño, R. Doallo. NBP-MPJ: NAS Parallel Benchmarks Implementation for Message-Passing in Java. 17th Euromicro Conference on Parallel, Distributed and Network-based Processing, PDP 2009, IEEE Computer Society, pp.181-190. Weimar (Germany), February 2009. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Java Fast Sockets: Enabling High-speed Java Communications on High Performance Clusters. Computer Communications, 31(17):4049-4059, November 2008. [DL]

G.L. Taboada, C. Teijeiro, J. Touriño. High Performance Java Remote Method Invocation for Parallel Computing on Clusters. 12th IEEE Symposium on Computers and Communications, ISCC 2007, IEEE Computer Society, pp.233-239. Aveiro (Portugal), July 2007. [DL]

G.L. Taboada, J. Touriño, R. Doallo. High Performance Java Sockets for Parallel Computing on Clusters. 9th International Workshop on Java and Components for Parallelism, Distribution and Concurrency, IWJPDC'07 (in conjunction with the 21st IEEE International Parallel and Distributed Processing Symposium, IPDPS'2007), IEEE Computer Society, pp.197b (8 pages). Long Beach, California (USA), March 2007. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Efficient Java Communication Protocols on High-Speed Cluster Interconnects. 31st IEEE Conference on Local Computer Networks, LCN 2006, IEEE Computer Society, pp.264-271. Tampa, Florida (USA), November 2006. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Non-blocking Java Communications Support on Clusters. 13th European PVM/MPI Users' Group Meeting, EuroPVM/MPI'06, Lecture Notes in Computer Science Vol. 4192, pp.256-265. Bonn (Germany), September 2006. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Designing Efficient Java Communications on Clusters. 7th International Workshop on Java for Parallel and Distributed Computing (in conjunction with the 19th IEEE International Parallel and Distributed Processing Symposium, IPDPS'2005), IEEE Computer Society, pp.182 (7 pages). Denver, Colorado (USA), April 2005. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Performance Analysis of Java Message-Passing Libraries on Fast Ethernet, Myrinet and SCI Clusters. 5th IEEE International Conference on Cluster Computing, Cluster 2003, IEEE Computer Society, pp.118-126. Hong Kong (China), December 2003. [DL]

G.L. Taboada, J. Touriño, R. Doallo. Performance Modeling and Evaluation of Java Message-Passing Primitives on a Cluster. 10th European PVM/MPI Users' Group Meeting, EuroPVM/MPI'2003, Lecture Notes in Computer Science Vol. 2840, pp.29-36. Venice (Italy), September 2003. [DL]

1. Compilers and architectures for HPC

2. Big Data, cloud computing, grid computing and distributed systems

3. Parallel algorithms & applications

4. Performance modeling, optimization and information gathering of HPC architectures

5. Java/low-latency communications for HPC

6. Fault tolerance: checkpointing of parallel applications

7. Languages and libraries for HPC

UPC (Unified Parallel C)

8. Geographic information systems (GIS applied to land consolidation/management and meteorology)